PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC041121.50
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 285aa    MW: 31542.8 Da    PI: 6.7099
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC041121.50genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-081356754
                  HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH  7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                   rE+ RRdr+N+ f eL   l ++     +K++Ka+iL  +++ +k+L
  EcC041121.50 13 GREKLRRDRLNEHFIELGNTLDPD----RPKNDKATILSDTIQLLKDL 56
                  59*******************997....79***************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.227656IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.3E-12878IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.67E-131075IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-61256IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.2E-61262IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.16E-61460No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
RDEVAVLKSQ KAGREKLRRD RLNEHFIELG NTLDPDRPKN DKATILSDTI QLLKDLTAQV  60
NQLKAEYSTL CEESHELTQE KNDLREEKAS LKSDTESLNA QYQQRARAMF PWPIMDHSVV  120
MAPPSYPYPV PVAVPSGPIP VHPPMQPYPF YATPNSSVFP NSHSTLLPFA TPNMQFEQLS  180
GHYAHPLMHL GNQSLVSSNK NDKGKERKHE KSGSSNDVTT DLELKTPGSA TDNESSSPHR  240
SSTKSMRKDD DTAERSSSTH SSSPHSVQDS SSSSIAGGSH SRAND
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010066253.11e-175PREDICTED: transcription factor bHLH121-like
RefseqXP_010066254.11e-175PREDICTED: transcription factor bHLH121-like
SwissprotQ9LT234e-78BH121_ARATH; Transcription factor bHLH121
TrEMBLA0A059BEI91e-175A0A059BEI9_EUCGR; Uncharacterized protein
STRINGSolyc01g111130.2.11e-103(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM23532762
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.17e-74bHLH family protein